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Live without tobacco project

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First open-source tobacco intervention, a fully-automated website built mainly using Java and open-source software. The content is based on widely accepted guidelines for tobacco and dependence treatment and scientific research.

MassChroQ

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MassChroQ (Mass Chromatogram Quantification) software performs quantification of data obtained from mass-spectrometry techniques. It is particularly well suited for peptide quantification of LC-MS (Liquid Chromatography - Mass Spectrometry) data. It performs chromatographic alignment, XIC extraction, peak detection and quantification on identified peptides, with or without isotopic labeling, on high or low resolution data and it takes into account peptide or protein fractionation.

GIMIAS

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GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.

GIMIAS suites are collections of prototypes that build a complete platform for one or more clinical applications.

FreeDiams

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FreeDiams prescriber is the result of FreeMedForms prescriber plugins built into a standalone application. FreeDiams is a multi-platform (MacOS, Linux, FreeBSD, Windows), free and open source.

It is developed by medical doctors and is intended for use by these same professionals. It can be used alone to prescribe and / or test drug interactions within a prescription. It can be linked to any application thanks to its command line parameters. Available drugs databases : USA (FDA), Canadian (HCDPD), French (AFSSAPS), South African (SAEPI).

tinyHeb

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tinyHeb is a billing software for midwives in Germany to do the legal accounting with the health insurance companies in Germany. tinyHeb runs under Linux and Windows operating systems. It enables the midwives to produce paper and electronic bills, and meets the legal requirements of §301a, §302 SGB V, resp. The tariff structure introduced in 2007 is no problem at all.

PixelMed Java DICOM Toolkit

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PixelMed Java DICOM Toolkit is a stand-alone DICOM toolkit that implements code for reading and creating DICOM data, DICOM network and file support, a database of DICOM objects, support for display of directories, images, reports and spectra, and DICOM object validation.

The toolkit is a completely new implementation, which does not depend on any other DICOM tools, commercial or free. It does make use of other freely available pure Java tools for compression and XML and database support.

The R Project for Statistical Computing

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R is a language and environment for statistical computing and graphics. It is a GNU project which is similar to the S language and environment which was developed at Bell Laboratories (formerly AT&T, now Lucent Technologies) by John Chambers and colleagues. R can be considered as a different implementation of S. There are some important differences, but much code written for S runs unaltered under R."

The 'epitools' R Package

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"epitools (epidemiology tools) is an R package for epidemiologic computing and graphics."

The 'surveillance' R Package

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The R-package ’surveillance’ is a framework for the development and the evaluation of outbreak detection algorithms in univariate and multivariate routine collected public health surveillance data. Hence, potential users are biostatisticians, epidemiologists and others working in applied infectious disease epidemiology. However, applications could just as well originate from environmetrics, reliability engineering, econometrics or social sciences.

Simulation Open Framework Architecture (SOFA)

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SOFA is an Open Source framework primarily targeted at real-time simulation, with an emphasis on medical simulation. It is mostly intended for the research community to help develop newer algorithms, but can also be used as an efficient prototyping tool.

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