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Snofyre

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Snofyre is an open source, service oriented API for creating SNOMED CT enabled applications in Java. It provides a number of SNOMED CT related services out of the box. These services can be used:

  • as a starter for understanding how to add SNOMED CT functionality to an application.
  • to rapidly prototype a SNOMED CT enabled application.

Snofyre API aims to

  • reduce the 'ramp up' time needed to understand
  • and embed SNOMED CT functionality in an application.
Homepage: 
http://code.google.com/p/snofyre/

OpenHRE

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OpenHRE is the world's first open source toolkit that provides a standard and secure means to exchange data between existing health records systems. With OpenHRE, health professionals can locate, access, and review clinical data related to a specific health consumer, or acquire de-identified clinical data for population studies.

Homepage: 
http://openhre.org/

PyEEG

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A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.

Homepage: 
http://code.google.com/p/pyeeg/

Grassroots DICOM (GDCM)

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Your rating: None Average: 3.7 (11 votes)

Grassroots DICOM (GDCM) is an implementation of the DICOM standard designed to be open source so that researchers may access clinical data directly. GDCM includes a file format definition and a network communications protocol, both of which should be extended to provide a full set of tools for a researcher or small medical imaging vendor to interface with an existing medical database.

Homepage: 
http://gdcm.sourceforge.net

Axial 360

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Your rating: None Average: 2.3 (4 votes)
  • Axial 360 is an interface engine and connector library that enables health care systems of all types - hospital systems, lab systems, EHRs, HIEs, etc - to share clinical data when it is needed.
  • Axial 360 is built using best-of-bread open source components that enable improved scalability, extensibility, and modularity relative to other interface engines.
  • Axial 360 will feature a library of free “connectors” developed by the open source community, that will reduce the time required to interface with applications.
Homepage: 
http://code.google.com/p/axial360/

WEKA

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Your rating: None Average: 2.7 (3 votes)

Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes.

Homepage: 
http://www.cs.waikato.ac.nz/ml/weka/

dicompyler

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Your rating: None Average: 3.8 (9 votes)

dicompyler is an extensible, fully open source radiation therapy research platform based on the DICOM standard. It also functions as a cross-platform viewer for DICOM and DICOM RT objects. dicompyler is written in Python and is built on pydicom, wxPython, PIL, and matplotlib and runs on Windows, Mac OS X and Linux.

Homepage: 
http://code.google.com/p/dicompyler/

OpenIGTLink

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Your rating: None Average: 4 (4 votes)

The goal of OpenIGTLink is to provide a standardized mechanism to connect software/hardware through the network for image-guided therapy (IGT) applications. The features of OpenIGTLink include:

Homepage: 
http://www.na-mic.org/Wiki/index.php/OpenIGTLink

GIMIAS

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Your rating: None Average: 2.4 (8 votes)

GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.

GIMIAS suites are collections of prototypes that build a complete platform for one or more clinical applications.

Homepage: 
http://www.gimias.org/

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