Caret is a free, open-source, software package for structural and functional analyses of the cerebral and cerebellar cortex.
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The complexity of cellular networks is an outstanding challenge for documentation, visualisation and mathematical modelling. In this project, we develop a new way to describe these networks that minimises the combinatorial complexity and allows an automatic visualisation and export of mathematical (ODE/rulebased) models.
- Automatic visualiztion with Cytoscape.
- Automatic generation of rule based models for BioNetGen.
- Storage of biological facts that can be used for modelling.
Gwyddion is a modular program for SPM (scanning probe microscopy) data visualization and analysis. Primarily it is intended for analysis of height fields obtained by scanning probe microscopy techniques (AFM, MFM, STM, SNOM/NSOM), however it can be generally used for any other height field and image analysis, for instance for analysis of profilometry data.
It aims to provide multiplatform modular program for 2D data analysis that could be easily extended by modules and plug-ins.
3D medical image platform for visualization and image processing. Segmentation with Levels sets. Surface reconstruction with marching Cubes, texture Mapping and Raycasting, DICOM support.
MRmap is a flexible software tool that enables T1, T2, and T2* mapping from source images of multiple types of pulse sequences (IR-prepared multi-image T1 mapping, Look-Locker/ TOMROP T1 mapping, MOLLI T1 mapping; single- and multi-echo T2/ T2* mapping).
MRmap is a pure research tool and is not intended for any diagnostic or clinical use.
The HL7 Inspector is a useful hl7 tool for integration the HL7 in a health care environmental. It will help you to minimize the time for tuning the HL7 communication between systems such as HIS and RIS by analyzing and validating HL7 messages.
ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.4 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux.
RT_Image is an application developed in the Department of Radiation Oncology and MIPS at Stanford University. Coded in the Interactive Data Language (IDL, ITT Visual Information Solutions), RT_Image was originally designed in 2003 to generate radiotherapy target volumes from positron emission tomography (PET) datasets. It has since evolved to embody a variety of tools for visualizing, quantitating, and segmenting three-dimensional images.
EGADSS (Evidence-based Guideline and Decision Support System) is an open source tool that is designed to work in conjunction with primary care Electronic Medical Record (EMR) systems to provide patient specific point of care reminders in order to aid physicians provide high quality care. EGADSS is designed as a stand alone system that would respond to requests from existing Electronic Medical Records such as Wolf, Med Access, and MedOffIS to provide patient specific clinical guidance based on its internal collection of guidelines.
"Real-time Outbreak and Disease Surveillance (RODS) is open-source public health surveillance software. RODS collects and analyzes disease surveillance data in real time and has been in development since 1999 by the RODS Laboratory. In 2002, the Utah Department of Health used the software for monitoring during the Winter Olympics Games. At present, health departments and other groups in the United States, Canada and Taiwan use the software."