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OBsched

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Occupancy in certain hospital patient care units is impacted by procedure scheduling policies and practices. For example, intensive care unit occupancy is strongly related to open heart surgery schedules. Similarly, occupancy in obstetrical postpartum units is impacted by the daily number of scheduled labor inductions and cesarean sections. That was the motivation for this project.

OBsched is a set of optimization models and supporting software for exploring the relationship between patient scheduling and nursing unit occupancy in hospitals.

QuickViewHL7

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HL7 file viewer, in tree-view format, with associated segment/field documentation. The latest release now includes editing, at all levels in the tree-view, e.g segment, field or component values. Purpose is for testing and bug-tracing HL7 communications.

Medical Imaging Interaction Toolkit (MITK)

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The Medical Imaging Interaction Toolkit (MITK) is a free open-source software system for development of interactive medical image processing software. MITK combines the Insight Toolkit (ITK) and the Visualization Toolkit (VTK) with an application framework. As a toolkit, MITK offers those features that are relevant for the development of interactive medical imaging software covered neither by ITK nor VTK.

Core features of the MITK platform:

    Snofyre

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    Snofyre is an open source, service oriented API for creating SNOMED CT enabled applications in Java. It provides a number of SNOMED CT related services out of the box. These services can be used:

    • as a starter for understanding how to add SNOMED CT functionality to an application.
    • to rapidly prototype a SNOMED CT enabled application.

    Snofyre API aims to

    • reduce the 'ramp up' time needed to understand
    • and embed SNOMED CT functionality in an application.

    Ruby HL7

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    Your rating: None Average: 2.3 (4 votes)

    Ruby HL7 is a simple library for parsing and generating HL7 2.x messages. 3.x support is planned in the future.

    Medical Exploration Toolkit (METK)

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    Your rating: None Average: 1.7 (3 votes)

    The MedicalExplorationToolkit (METK) was designed for loading, visualizing and exploring segmented medical data sets. It is a framework of several modules in MeVisLab, a development environment for medical image processing and visualization.

    • Case Management: Load and save whole cases of segmented structures e.g. for surgery planning, educational training or intra operative visualization.
    • Basic Visualization in 2D and 3D: Visualize segmented structures in multiple manner e.g. iso surface rendering, stippling, hatching, silhouettes, volume rendering, 2d overlays.

    PyEEG

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    Your rating: None Average: 2.3 (3 votes)

    A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.

    OpenIGTLink

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    Your rating: None Average: 4 (4 votes)

    The goal of OpenIGTLink is to provide a standardized mechanism to connect software/hardware through the network for image-guided therapy (IGT) applications. The features of OpenIGTLink include:

    MassChroQ

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    MassChroQ (Mass Chromatogram Quantification) software performs quantification of data obtained from mass-spectrometry techniques. It is particularly well suited for peptide quantification of LC-MS (Liquid Chromatography - Mass Spectrometry) data. It performs chromatographic alignment, XIC extraction, peak detection and quantification on identified peptides, with or without isotopic labeling, on high or low resolution data and it takes into account peptide or protein fractionation.

    FSL

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    Your rating: None Average: 2.4 (8 votes)

    FMRIB Software Library (FSL) is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. FSL is written mainly by members of the Analysis Group, FMRIB, Oxford, UK. FSL runs on Apple and PCs (Linux and Windows), and is very easy to install. Most of the tools can be run both from the command line and as GUIs ("point-and-click" graphical user interfaces).

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