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FSL

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FMRIB Software Library (FSL) is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. FSL is written mainly by members of the Analysis Group, FMRIB, Oxford, UK. FSL runs on Apple and PCs (Linux and Windows), and is very easy to install. Most of the tools can be run both from the command line and as GUIs ("point-and-click" graphical user interfaces).

LIMS for proteomics (LIPAGE)

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LIPAGE is an open source laboratory information management system for 2DPAGE-based proteomics.

ParaView

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ParaView is an open-source, multi-platform data analysis and visualization application. ParaView users can quickly build visualizations to analyze their data using qualitative and quantitative techniques. The data exploration can be done interactively in 3D or programmatically using ParaView's batch processing capabilities.

ParaView was developed to analyze extremely large datasets using distributed memory computing resources. It can be run on supercomputers to analyze datasets of terascale as well as on laptops for smaller data.

OpenEEG

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The OpenEEG project is about creating a low cost EEG device. Working hardware has been built and is in a late beta stage. Software is still only alpha.

Many people are interested in what is called neurofeedback or EEG biofeedback training, a generic mental training method which makes the trainee consciously aware of the general activity in the brain. This method shows great potential for improving many mental capabilities and exploring consciousness. Other people want to do experiments with brain-computer interfaces or just want to have a look at their brain at work.

Observational Health Data Sciences and Informatics

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The Observational Health Data Sciences and Informatics (or OHDSI, pronounced "Odyssey") program is a multi-stakeholder, interdisciplinary collaborative to bring out the value of health data through large-scale analytics. All our solutions are open-source.

OHDSI has established an international network of researchers and observational health databases with a central coordinating center housed at Columbia University.

i2b2

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i2b2 (Informatics for Integrating Biology and the Bedside) is an NIH-funded National Center for Biomedical Computing based at Partners HealthCare System. The i2b2 Center is developing a scalable informatics framework that will enable clinical researchers to use existing clinical data for discovery research and, when combined with IRB-approved genomic data, facilitate the design of targeted therapies for individual patients with diseases having genetic origins. This platform currently enjoys wide international adoption by the CTSA network, academic health centers, and industry.

EtherCIS

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Clinical Data Repository
Healthcare is Information Intensive - Data: Information: Knowledge
21st Century Healthcare is under pressure, around the globe.
We need to work smarter not harder – to survive, yet alone thrive.
Currently Health IT is holding healthcare back.
We must raise our game in this information intensive field

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