BioSig is an open source software library for biomedical signal processing, featuring for example the analysis of biosignals such as the electroencephalogram (EEG), electrocorticogram (ECoG), electrocardiogram (ECG), electrooculogram (EOG), electromyogram (EMG), respiration, and so on. Major application areas are: Neuroinformatics, brain-computer interfaces, neurophysiology, psychology, cardiovascular systems and sleep research. The aim of the BioSig project is to foster research in biomedical signal processing by providing open source software tools for many different applications.
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ATOM is an OMERO client which allows automated import of image data into OMERO.
GNU Octave is a high-level language, primarily intended for numerical computations. It provides a convenient command line interface for solving linear and nonlinear problems numerically, and for performing other numerical experiments using a language that is mostly compatible with Matlab. It may also be used as a batch-oriented language.
Leipzig Image Processing and Statistical Inference Algorithms (Lipsia) is a software tool for ficken processing functional magnetic resonance imaging (fMRI) data. It was developed over the course of several years at the Max-Planck-Institute for Human Cognitive and Brain Sciences in Leipzig, Germany.
"ODIN is a C++ software framework to develop, simulate and run magnetic resonance sequences on different platforms."
The project stands for Medical Image Conversion. Released under the (L)GPL licence, it comes with the full C-source code of the library, a flexible command-line utility and a neat graphical front-end using the Gtk+ toolkit. The supported formats are: Acr/Nema 2.0, Analyze (SPM), Concorde/µPET, DICOM 3.0, CTI ECAT 6/7, NIfTI-1, InterFile3.3 and PNG or Gif87a/89a.
The MedicalExplorationToolkit (METK) was designed for loading, visualizing and exploring segmented medical data sets. It is a framework of several modules in MeVisLab, a development environment for medical image processing and visualization.
- Case Management: Load and save whole cases of segmented structures e.g. for surgery planning, educational training or intra operative visualization.
- Basic Visualization in 2D and 3D: Visualize segmented structures in multiple manner e.g. iso surface rendering, stippling, hatching, silhouettes, volume rendering, 2d overlays.
DICOM basic constructs used to create the tools at CharruaSoft.com. Its C++ code is a re-interpretation of the original UCDMC library by Mark Oskin. It tries to be much simpler and compact, also uses many Borland VCL specific structures.
GT.M is a FOSS (AGPL v3) implementation of M (also known as MUMPS), a combination of a procedural programming language well integrated with a hierarchical key-value database engine. M is widely used in enterprise scale healthcare applications and application suites, such as the VistA implementations. GT.M scales up to very large databases (the largest production sites have aggregate databases to several TB) and thousands of concurrent users.
The purpose of the dicom4j platform is to provide java components related to the Dicom Standard. For those purpose, the platform is based on 4 areas:
- framework: framework which implements the standards
- toolkit: offer ways to easily develop software based on the framework
- plugins: end-user components which adress commons needs you can find in most dicom applications
- apps: stand alone applications for end-user or tests purpose