Grassroots DICOM (GDCM) is an implementation of the DICOM standard designed to be open source so that researchers may access clinical data directly. GDCM includes a file format definition and a network communications protocol, both of which should be extended to provide a full set of tools for a researcher or small medical imaging vendor to interface with an existing medical database.
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Gwyddion is a modular program for SPM (scanning probe microscopy) data visualization and analysis. Primarily it is intended for analysis of height fields obtained by scanning probe microscopy techniques (AFM, MFM, STM, SNOM/NSOM), however it can be generally used for any other height field and image analysis, for instance for analysis of profilometry data.
It aims to provide multiplatform modular program for 2D data analysis that could be easily extended by modules and plug-ins.
The openGPSoC project came to life in September 2012 after a conversation at NHS Hack Day ’2′ in Liverpool. The idea of a fully open source GP clinical system has been suggested and discussed many times in the past, however due to the stringent requirements of any such software it is recognised as a very hard thing to try to achieve. While we recognised this difficulty, we also felt there were a number of opportunities at present which might make such a project possible.
Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 data format. nifti-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images.
Niftilib currently has C, Java, MATLAB, and Python libraries; we plan to add some MATLAB/mex interfaces to the C library in the not too distant future.
DICOM# open source project is intented to provide an OO class library for DICOM communication and will be developed purely by C# and running in .NET environment. DICOM# partially rewrites dcm4che open source project in C#.
The epSOS project has released interoperability specifications (Common Components Specification) for national Contact Points (NCPs) to interact and support epSOS defined services such as patient summary and prescription. epSOS has also established a testing process for testing compliant implementations of these specifications, and ensure their interoperability.
Indivo is the original personally controlled health record (PCHR) system. A PCHR enables an individual to own and manage a complete, secure, digital copy of her health and wellness information. Indivo integrates health information across sites of care and over time. Indivo is free and open-source, uses open, unencumbered standards, and is actively deployed in diverse settings, in particular our own Children's Hospital Boston and the Dossia Consortium.
HAPI (HL7 application programming interface; pronounced "happy") is an open-source, object-oriented HL7 2.x parser and encoder for HL7 version 2.x messages written in Java. This project is not affiliated with the HL7 organization; we are just writing some software that conforms to their specification. The project was initiated by University Health Network (a large multi-site teaching hospital in Toronto, Canada).
C# ECG Toolkit is an open source software toolkit to convert, view and print electrocardiograms. The toolkit is developed using C# .NET 1.1 & 2.0. Support for ECG formats: SCP-ECG, DICOM and HL7 aECG.
.Net version of HAPI. Object oriented HL7 2.X parser. This was ported from the original HAPI by Bryan Tripp and University Health Network. HL7 parser/encoder written in Microsoft .Net C#. Can encode/decode both XML and Pi.