Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes.
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A C++ package for low-frequency bio-electromagnetism solving forward problems in the field of EEG and MEG.
ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.4 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux.
MediPy is a cross-platform software (Windows, Linux, Mac OS), dedicated to the visualization and processing aspects of medical imaging. It is targeted at both physicians and researchers, being both user-friendly and easy to extend. Physicians will benefit from the pre-programmed tasks (e.g. segmentation, registration, detection of lesions) and the possibility to record new tasks, tailoring the software to each user. The use of standard file formats (Analyze/Nifti, Dicom) allows to load image from many sources, as well as integrate to a PACS.
"Real-time Outbreak and Disease Surveillance (RODS) is open-source public health surveillance software. RODS collects and analyzes disease surveillance data in real time and has been in development since 1999 by the RODS Laboratory. In 2002, the Utah Department of Health used the software for monitoring during the Winter Olympics Games. At present, health departments and other groups in the United States, Canada and Taiwan use the software."
MITK 3M3 is a free and user-friendly application which ensures effective and efficient work, analysis, and visualization of radiological image data.
MITK 3M3 gives you access to the latest algorithms and methods from research. The cooperation between the German Cancer Research Center (DKFZ) and mint medical allows for a rapid transfer of leading-edge research topics, including diffusion imaging and automated segmentation techniques. MITK 3M3 will be constantly extended with the addition of new software modules to bring the latest research work to your computer.
Zyxware Health Monitoring System is a web based disease monitoring for monitoring diseases like chikungunya, malaria - reported by hospitals in a district, county, state or country. There is a reporting & analysis module and a GIS module which displays the data using google maps.
The Medical Imaging Interaction Toolkit (MITK) is a free open-source software system for development of interactive medical image processing software. MITK combines the Insight Toolkit (ITK) and the Visualization Toolkit (VTK) with an application framework. As a toolkit, MITK offers those features that are relevant for the development of interactive medical imaging software covered neither by ITK nor VTK.
Core features of the MITK platform:
EEG-Holter is designed for analysis of long-term EEG - Holter. Java developed, it supports medical and logbook anotations, epileptic events data, graphics and EDF files.
ImmunoRatio is a free web application for automated image analysis of estrogen receptor (ER), progesterone receptor (PR), and Ki-67 immunostained tissue sections.
- segments diaminobenzidine-stained (DAB) and hematoxylin-stained nuclei regions from the user-submitted image,
- calculates the percentage of DAB-stained nuclear area over total nuclear area (=labeling index), and
- generates a pseudo-colored result image matching the area segmentation (see the example on right side).