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Medical Imaging Interaction Toolkit (MITK)

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The Medical Imaging Interaction Toolkit (MITK) is a free open-source software system for development of interactive medical image processing software. MITK combines the Insight Toolkit (ITK) and the Visualization Toolkit (VTK) with an application framework. As a toolkit, MITK offers those features that are relevant for the development of interactive medical imaging software covered neither by ITK nor VTK.

Core features of the MITK platform:

    EEG-Holter

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    EEG-Holter is designed for analysis of long-term EEG - Holter. Java developed, it supports medical and logbook anotations, epileptic events data, graphics and EDF files.

    ImmunoRatio

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    Your rating: None Average: 3.3 (12 votes)

    ImmunoRatio is a free web application for automated image analysis of estrogen receptor (ER), progesterone receptor (PR), and Ki-67 immunostained tissue sections.

    The application:

    1. segments diaminobenzidine-stained (DAB) and hematoxylin-stained nuclei regions from the user-submitted image,
    2. calculates the percentage of DAB-stained nuclear area over total nuclear area (=labeling index), and
    3. generates a pseudo-colored result image matching the area segmentation (see the example on right side).

    MRmap

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    Your rating: None Average: 3.2 (14 votes)

    MRmap is a flexible software tool that enables T1, T2, and T2* mapping from source images of multiple types of pulse sequences (IR-prepared multi-image T1 mapping, Look-Locker/ TOMROP T1 mapping, MOLLI T1 mapping; single- and multi-echo T2/ T2* mapping).

    MRmap is a pure research tool and is not intended for any diagnostic or clinical use.

    Vurtigo

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    Your rating: None Average: 3 (2 votes)

    Vurtigo is a four-dimensional (3D + time) real-time visualization software for guiding cardiovascular interventions. It is designed to be part of a pipeline that can connect it to a magnetic resonance imaging (MRI) scanner, actively tracked catheters, and navigational devices.

    Written in C++ under the GNU Lesser General Public License v2.1, Vurtigo features a plug-in based architecture, allowing developers to extend the software using an interface to manipulate objects within Vurtigo. The software runs on Win32, Linux and Mac OS X.

    WEKA

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    Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes.

    MediPy

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    Your rating: None Average: 3.3 (3 votes)

    MediPy is a cross-platform software (Windows, Linux, Mac OS), dedicated to the visualization and processing aspects of medical imaging. It is targeted at both physicians and researchers, being both user-friendly and easy to extend. Physicians will benefit from the pre-programmed tasks (e.g. segmentation, registration, detection of lesions) and the possibility to record new tasks, tailoring the software to each user. The use of standard file formats (Analyze/Nifti, Dicom) allows to load image from many sources, as well as integrate to a PACS.

    ImageJ

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    Your rating: None Average: 3.6 (9 votes)

    ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.4 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux.

    MITK 3M3

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    MITK 3M3 is a free and user-friendly application which ensures effective and efficient work, analysis, and visualization of radiological image data.

    MITK 3M3 gives you access to the latest algorithms and methods from research. The cooperation between the German Cancer Research Center (DKFZ) and mint medical allows for a rapid transfer of leading-edge research topics, including diffusion imaging and automated segmentation techniques. MITK 3M3 will be constantly extended with the addition of new software modules to bring the latest research work to your computer.

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