Dcmrouter is a java-solution of a "Dicom Router" which is able to recieve Dicom Objects and transmit them after manipulating with plugins.
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ATOM is an OMERO client which allows automated import of image data into OMERO.
ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.4 or later virtual machine. Downloadable distributions are available for Windows, Mac OS, Mac OS X and Linux.
The IHE Cross Enterprise Document Sharing (XDS.b) integration profile facilitates the registration, distribution and access across health enterprises of patient electronic health records. XDS.b is focused on providing a standards-based specification for managing the sharing of medical summary documents between any healthcare enterprise, ranging from a private physician office to a clinic to an acute care in-patient facility.
HAPI (HL7 application programming interface; pronounced "happy") is an open-source, object-oriented HL7 2.x parser and encoder for HL7 version 2.x messages written in Java. This project is not affiliated with the HL7 organization; we are just writing some software that conforms to their specification. The project was initiated by University Health Network (a large multi-site teaching hospital in Toronto, Canada).
This project holds an implementation of the Cross-Enterprise Document Sharing (XDS) profile as defined by IHE (ihe.net). It includes implementations of both the Document Registry and Document Repository actors.
The project is deployed at the XDS Public Registry Test Facility of the National Institute of Standards and Technology (NIST).
DicomBrowser is an application for inspecting and modifying DICOM metadata in many files at once. A single imaging session can produce thousands of DICOM files; DicomBrowser allows users to view and edit a whole session—or even multiple sessions—at once. Users can save the original or modified files to disk, or send them across a network to a DICOM C-STORE service class provider, such as a PACS or an XNAT.
This project provides a simple but flexible Perl Toolkit for using the HL7 protocol. The toolkit consists of a Perl API, an implementation of a pluggable forking HL7 server, and an HL7 message queue daemon for developing HL7 capable applications in Perl.
ATNA is an IHE security profile representing Audit Trail and Node Authentication. OpenATNA is an implementation of an Audit Record Repository supporting RFC 3881 audit messages over BSD Syslog as well as RFC 5424-5426 (UDP and TLS).
- Optimizes the database so that entities such as active participants, audit sources, participant objects and codes are not duplicated for every message received.
- Performs validation of messages as they arrive.
- Optionally logs errors as well as audit messages.
- Supports TLS and UDP.
The complexity of cellular networks is an outstanding challenge for documentation, visualisation and mathematical modelling. In this project, we develop a new way to describe these networks that minimises the combinatorial complexity and allows an automatic visualisation and export of mathematical (ODE/rulebased) models.
- Automatic visualiztion with Cytoscape.
- Automatic generation of rule based models for BioNetGen.
- Storage of biological facts that can be used for modelling.