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3D medical image platform for visualization and image processing. Segmentation with Levels sets. Surface reconstruction with marching Cubes, texture Mapping and Raycasting, DICOM support.
JULIDE is a software toolkit developed to perform the 3D reconstruction, intensity normalization, volume standardization by 3D image registration and voxel-wise statistical analysis of autoradiographs of mouse brain sections.
Amide's a Medical Imaging Data Examiner (AMIDE) is a completely free tool for viewing, analysing, and registering volumetric medical imaging data sets. It's been written on top of GTK+ , and runs on any system that supports this toolkit (Linux, Windows, Mac OS X with fink, etc.).
Brainstorm is a collaborative open-source Matlab application dedicated to magnetoencephalography (MEG) and electroencephalography(EEG) data visualization, processing and cortical source estimation.
The intention is to make a comprehensive set of tools available to the scientific community involved in MEG/EEG experimental research.
For physicians and researchers, the interest of this software package resides in its rich and intuitive graphic interface, which does not require any programming knowledge.
STIR is Open Source software for use in tomographic imaging. Its aim is to provide a Multi-Platform Object-Oriented framework for all data manipulations in tomographic imaging. Currently, the emphasis is on (iterative) image reconstruction in PET, but other application areas and imaging modalities can and might be added.
STIR is the successor of the PARAPET software library which was the result of a (European Union funded) collaboration between 6 different partners (see Credits).
DiagnosisMed is a package to analyze data from diagnostic test accuracy evaluating health conditions. It is being built to be used by health professionals. This package is able to estimate sensitivity and specificity from categorical and continuous test results including some evaluations of indeterminate results, or compare different categorical tests, and estimate reasonble cut-offs of tests and display it in a way commonly used by health professionals. No graphical interface is avalible yet. Partners are most welcome.
The Epi package is mainly focused on "classical" chronic disease epidemiology. The package has grown out of the course Statistical Practice in Epidemiology using R.
This package contains elementary tools for analysis of common epidemiological problems, ranging from sample size estimation, through 2x2 contingency table analysis and basic measures of agreement (kappa, sensitivity/specificity).
Appropriate print and summary statements are also written to facilitate interpretation wherever possible.
This package is a work in progress, so any comments or suggestions would be appreciated. Source code is commented throughout to facilitate modification. The target audience includes graduate students in various epi/biostatistics courses.
Functions making R easy for epidemiological calculation.
Datasets from Dbase (.dbf), Stata (.dta), SPSS(.sav), EpiInfo(.rec) and Comma separated value (.csv) formats as well as R data frames can be processed to do make several epidemiological calculations.
"epitools (epidemiology tools) is an R package for epidemiologic computing and graphics."
"According to the homepage: "After nearly 10 years, the openCDMS system..."
posted by holger on openCDMS 6 years 7 months
"For details about the fork see these discussions FreeHealth 7 years 1 month
"Glucosio wins award from Black Duck for top new OSS projects in 2015!
..."
posted by demski on Glucosio 8 years 3 days
"Free D Path in 2014 won an award in the category of ‘best use of IT to..."
posted by demski on Free D Path 9 years 1 month
"AuShadha Open Source EMR has moved to Django 1.7.x
..."
posted by dreaswar on AuShadha 9 years 4 months