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Medical Imaging Interaction Toolkit (MITK)

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The Medical Imaging Interaction Toolkit (MITK) is a free open-source software system for development of interactive medical image processing software. MITK combines the Insight Toolkit (ITK) and the Visualization Toolkit (VTK) with an application framework. As a toolkit, MITK offers those features that are relevant for the development of interactive medical imaging software covered neither by ITK nor VTK.

Core features of the MITK platform:

    FreeSHIM

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    FreeSHIM is an opensource electronic medical device interface, which aims to allow any EMR/PM system to talk to any medical device attached to a workstation without having to install tons of pesky drivers or “reinvent the wheel” for each additional device manufacturer.

    It is written in Java, and has been tested on Linux and Windows workstations (though we’re pretty sure it also runs fine on Mac OS X as well), and exposes both SOAP and REST interfaces. Its only prerequisite is a running J2EE container, such as Apache Tomcat.

    FrameWork for Software Production Line (FW4SPL)

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    FW4SPL is a component-oriented architecture with the notion of role-based programming. FW4SPL consists of a set of cross-platform C++ libraries. For now, FW4SPL focuses on the problem of medical images processing and visualization.

    Ruby DICOM

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    UBY DICOM is a cross-platform library for handling DICOM files and network communication in the Ruby language. DICOM is a standard that is widely used throughout the world for saving and transmitting image data used in medicine. The library supports reading, editing and writing files as well as querying, retrieving and sending files.

    Charrua DICOM Toolkit

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    DICOM basic constructs used to create the tools at CharruaSoft.com. Its C++ code is a re-interpretation of the original UCDMC library by Mark Oskin. It tries to be much simpler and compact, also uses many Borland VCL specific structures.

    pydicom

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    pydicom is a pure python package for working with DICOM files. It was made for inspecting and modifying DICOM data in an easy "pythonic" way. The modifications can be written again to a new file. As a pure python package, it should run anywhere python runs without any other requirements.

    pydicom is not a DICOM server, and is not primarily about viewing images. It is designed to let you manipulate data elements in DICOM files with python code.

    Grassroots DICOM (GDCM)

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    Grassroots DICOM (GDCM) is an implementation of the DICOM standard designed to be open source so that researchers may access clinical data directly. GDCM includes a file format definition and a network communications protocol, both of which should be extended to provide a full set of tools for a researcher or small medical imaging vendor to interface with an existing medical database.

    ctapi-mkt

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    Library and program to read the german health insurance card (KVK) and the german electronic health card (eGK) from a certified card reading device on the serial port in Linux with kernel 2.6.x.

    Niftilib

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    Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 data format. nifti-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images.

    Niftilib currently has C, Java, MATLAB, and Python libraries; we plan to add some MATLAB/mex interfaces to the C library in the not too distant future.

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