Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes.
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The National Cancer Institute (NCI) has launched the caBIG initiative to accelerate research discoveries and improve patient outcomes by linking researchers, physicians, and patients throughout the cancer community.
The Project HealthDesign Common Platform is a set of software components that provide common, shared functions to a variety of personal health applications (PHAs). The goal of “centralizing” these functions is to reduce personal health application implementation time and increase interoperability among the PHAs. The common platform components are currently implemented as web services that PHAs may access via standard web interfaces. Services exist for storing observations and medications, as well as for providing authentication, registry, and access-control functions.
To lower the barrier to integration and expedite health care interoperability, Open Health Tools provides client side implementations of several key IHE profiles. These implementations were used successfully by over 35 systems to date at the 2007-2010 Connectathons in North America and Europe.
Laika analyzes and reports on the interoperability capabilities of EHR systems. This includes the testing for certification of EHR software products and networks.
To support EHR data interoperability testing, Laika is designed to verify the input and output of EHR data against the standards and criteria identified by the Certification Commission for Health Information Technology (CCHIT). Laika is used by the Certification Commission to perform part of the interoperability certification inspection of EHRs.
FreeSHIM is an opensource electronic medical device interface, which aims to allow any EMR/PM system to talk to any medical device attached to a workstation without having to install tons of pesky drivers or “reinvent the wheel” for each additional device manufacturer.
It is written in Java, and has been tested on Linux and Windows workstations (though we’re pretty sure it also runs fine on Mac OS X as well), and exposes both SOAP and REST interfaces. Its only prerequisite is a running J2EE container, such as Apache Tomcat.
YaNuCa (Yet Another Nutrition Calculator) is a web-based nutrition calculator for parenteral and enteral nutrition in adult intensive care patients.
MRmap is a flexible software tool that enables T1, T2, and T2* mapping from source images of multiple types of pulse sequences (IR-prepared multi-image T1 mapping, Look-Locker/ TOMROP T1 mapping, MOLLI T1 mapping; single- and multi-echo T2/ T2* mapping).
MRmap is a pure research tool and is not intended for any diagnostic or clinical use.
RapidSMS is a SMS-based (text message) framework that manages data collection, complex workflows, and group coordination using basic mobile phones — and can present information on the internet as soon as it is received. So far RapidSMS has been customized and deployed with diverse functionality: remote health diagnostics, nutrition surveillance, supply chain tracking, registering children in public health campaigns, and community discussion.
The iHRIS Suite of open source software supplies health sector leaders with information to track, manage, and plan the health workforce. Because the software is open source, it can be downloaded for free and customized for local needs. Each product addresses a specific health workforce leadership issue: