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A
L. E. Fazen, Chemwolo, B. T., Songok, J. J., Ruhl, L. J., Kipkoech, C., Green, J. M., Ikemeri, J. E., and Christoffersen-Deb, A., “AccessMRS: integrating OpenMRS with smart forms on Android.”, Stud Health Technol Inform, vol. 192, pp. 866-70, 2013.
A. Søvik, Rødal, J., Skogmo, H. K., Lervåg, C., Eilertsen, K., and Malinen, E., “Adaptive radiotherapy based on contrast enhanced cone beam CT imaging.”, Acta oncologica (Stockholm, Sweden), vol. 49, no. 7, pp. 972-7, 2010.
A. Søvik, Rødal, J., Skogmo, H. K., Lervåg, C., Eilertsen, K., and Malinen, E., “Adaptive radiotherapy based on contrast enhanced cone beam CT imaging.”, Acta oncologica (Stockholm, Sweden), vol. 49, no. 7, pp. 972-7, 2010.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
S. M. Smith, Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I., Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, M. J., and Matthews, P. M., “Advances in functional and structural MR image analysis and implementation as FSL.”, NeuroImage, vol. 23 Suppl 1, pp. S208-19, 2004.
G. Zangara, Valentino, F., Spinelli, G., Valenza, M., Marcheggiani, A., and Di Blasi, F., “An Albanian open source telemedicine platform.”, Telemed J E Health, vol. 20, no. 7, pp. 673-7, 2014.
J. W. Dietrich, Stachon, A., Antic, B., Klein, H. H., and Hering, S., “The AQUA-FONTIS study: protocol of a multidisciplinary, cross-sectional and prospective longitudinal study for developing standardized diagnostics and classification of non-thyroidal illness syndrome.”, BMC Endocr Disord, vol. 8, p. 13, 2008.
M. Gietzelt, Goltz, U., Grunwald, D., Lochau, M., Marschollek, M., Song, B., and Wolf, K. - H., “Arden2ByteCode: A one-pass Arden Syntax compiler for service-oriented decision support systems based on the OSGi platform.”, Comput Methods Programs Biomed, 2011.
M. Gietzelt, Goltz, U., Grunwald, D., Lochau, M., Marschollek, M., Song, B., and Wolf, K. - H., “ARDEN2BYTECODE: a one-pass Arden Syntax compiler for service-oriented decision support systems based on the OSGi platform.”, Comput Methods Programs Biomed, vol. 106, no. 2, pp. 114-25, 2012.
E. M. Steele and Steele, D. S., “Automated Detection and Analysis of Ca(2+) Sparks in x-y Image Stacks Using a Thresholding Algorithm Implemented within the Open-Source Image Analysis Platform ImageJ.”, Biophys J, vol. 106, no. 3, pp. 566-76, 2014.
E. M. Steele and Steele, D. S., “Automated Detection and Analysis of Ca(2+) Sparks in x-y Image Stacks Using a Thresholding Algorithm Implemented within the Open-Source Image Analysis Platform ImageJ.”, Biophys J, vol. 106, no. 3, pp. 566-76, 2014.
J. M. Kariuki, Manders, E. - J., Richards, J., Oluoch, T., Kimanga, D., Wanyee, S., Kwach, J. O., and Santas, X., “Automating indicator data reporting from health facility EMR to a national aggregate data system in Kenya: An Interoperability field-test using OpenMRS and DHIS2.”, Online J Public Health Inform, vol. 8, no. 2, p. e188, 2016.
B
M. W. Woolrich, Jbabdi, S., Patenaude, B., Chappell, M., Makni, S., Behrens, T., Beckmann, C., Jenkinson, M., and Smith, S. M., “Bayesian analysis of neuroimaging data in FSL.”, NeuroImage, vol. 45, no. 1 Suppl, pp. S173-86, 2009.
S. Rea, Pathak, J., Savova, G., Oniki, T. A., Westberg, L., Beebe, C. E., Tao, C., Parker, C. G., Haug, P. J., Huff, S. M., and Chute, C. G., “Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project.”, J Biomed Inform, 2012.
C
D. S. Channin, Mongkolwat, P., Kleper, V., Sepukar, K., and Rubin, D. L., “The caBIG annotation and image Markup project.”, J Digit Imaging, vol. 23, no. 2, pp. 217-25, 2010.
R. R. Freimuth, Schauer, M. W., Lodha, P., Govindrao, P., Nagarajan, R., and Chute, C. G., “caBIG compatibility review system: software to support the evaluation of applications using defined interoperability criteria.”, AMIA .. Annual Symposium proceedings / AMIA Symposium. AMIA Symposium, pp. 197-201, 2008.
J. J. Cimino, Hayamizu, T. F., Bodenreider, O., Davis, B., Stafford, G. A., and Ringwald, M., “The caBIG terminology review process.”, J Biomed Inform, vol. 42, no. 3, pp. 571-80, 2009.
L. Becnel Boyd, Hunicke-Smith, S. P., Stafford, G. A., Freund, E. T., Ehlman, M., Chandran, U., Dennis, R., Fernandez, A. T., Goldstein, S., Steffen, D., Tycko, B., and Klemm, J. D., “The caBIG® Life Science Business Architecture Model.”, Bioinformatics, vol. 27, no. 10, pp. 1429-35, 2011.
L. Becnel Boyd, Hunicke-Smith, S. P., Stafford, G. A., Freund, E. T., Ehlman, M., Chandran, U., Dennis, R., Fernandez, A. T., Goldstein, S., Steffen, D., Tycko, B., and Klemm, J. D., “The caBIG® Life Science Business Architecture Model.”, Bioinformatics, vol. 27, no. 10, pp. 1429-35, 2011.
S. Oster, Langella, S., Hastings, S., Ervin, D., Madduri, R., Phillips, J., Kurc, T., Siebenlist, F., Covitz, P., Shanbhag, K., Foster, I., and Saltz, J., “caGrid 1.0: an enterprise Grid infrastructure for biomedical research.”, Journal of the American Medical Informatics Association : JAMIA, vol. 15, no. 2, pp. 138-49, 2008.
S. Oster, Langella, S., Hastings, S., Ervin, D., Madduri, R., Phillips, J., Kurc, T., Siebenlist, F., Covitz, P., Shanbhag, K., Foster, I., and Saltz, J., “caGrid 1.0: an enterprise Grid infrastructure for biomedical research.”, Journal of the American Medical Informatics Association : JAMIA, vol. 15, no. 2, pp. 138-49, 2008.
S. Oster, Langella, S., Hastings, S., Ervin, D., Madduri, R., Phillips, J., Kurc, T., Siebenlist, F., Covitz, P., Shanbhag, K., Foster, I., and Saltz, J., “caGrid 1.0: an enterprise Grid infrastructure for biomedical research.”, Journal of the American Medical Informatics Association : JAMIA, vol. 15, no. 2, pp. 138-49, 2008.
B. Cakici, Hebing, K., Grünewald, M., Saretok, P., and Hulth, A., “CASE: a framework for computer supported outbreak detection.”, BMC medical informatics and decision making, vol. 10, p. 14, 2010.
A. Neinstein, Wong, J., Look, H., Arbiter, B., Quirk, K., McCanne, S., Sun, Y., Blum, M., and Adi, S., “A case study in open source innovation: developing the Tidepool Platform for interoperability in type 1 diabetes management.”, J Am Med Inform Assoc, 2015.
L. D. McIntosh, Sharma, M. K., Mulvihill, D., Gupta, S., Juehne, A., George, B., Khot, S. B., Kaushal, A., Watson, M. A., and Nagarajan, R., “caTissue Suite to OpenSpecimen: developing an extensible, open source, web-based biobanking management system”, Journal of biomedical informatics, vol. 57, pp. 456 - 464, 2015.

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