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3
B. E. Jackson, Evangelista, D. J., Ray, D. D., and Hedrick, T. L., “3D for the people: multi-camera motion capture in the field with consumer-grade cameras and open source software.”, Biol Open, 2016.
A
G. van Valkenhoef, Tervonen, T., Zwinkels, T., de Brock, B., and Hillege, H., “ADDIS: a decision support system for evidence-based medicine”, Decision Support Systems, vol. in press, 2012.
J. Zhao, van Valkenhoef, G., de Brock, B., and Hillege, H., “ADDIS: an automated way to do network meta-analysis”. 2012.
J. W. Dietrich, Stachon, A., Antic, B., Klein, H. H., and Hering, S., “The AQUA-FONTIS study: protocol of a multidisciplinary, cross-sectional and prospective longitudinal study for developing standardized diagnostics and classification of non-thyroidal illness syndrome.”, BMC Endocr Disord, vol. 8, p. 13, 2008.
M. Klompas, Haney, G., Church, D., Lazarus, R., Hou, X., and Platt, R., “Automated identification of acute hepatitis B using electronic medical record data to facilitate public health surveillance.”, PloS one, vol. 3, no. 7, p. e2626, 2008.
M. Klompas, Haney, G., Church, D., Lazarus, R., Hou, X., and Platt, R., “Automated identification of acute hepatitis B using electronic medical record data to facilitate public health surveillance.”, PloS one, vol. 3, no. 7, p. e2626, 2008.
B. Haarbrandt, Tute, E., and Marschollek, M., “Automated population of an i2b2 clinical data warehouse from an {openEHR}-based data repository”, Journal of Biomedical Informatics, vol. 63, pp. 277–294, 2016.
B
A. Bessani, Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J. - E., Martinez, R., Niazi, S., Reichel, J., and Zimmermann, K., “BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets”, in Biomedical Data Management and Graph Online Querying: VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers, F. Wang, Luo, G., Weng, C., Khan, A., Mitra, P., and Yu, C., Eds. Cham: Springer International Publishing, 2016, pp. 89–105.
A. Bessani, Brandt, J., Bux, M., Cogo, V., Dimitrova, L., Dowling, J., Gholami, A., Hakimzadeh, K., Hummel, M., Ismail, M., Laure, E., Leser, U., Litton, J. - E., Martinez, R., Niazi, S., Reichel, J., and Zimmermann, K., “BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets”, in Biomedical Data Management and Graph Online Querying: VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers, F. Wang, Luo, G., Weng, C., Khan, A., Mitra, P., and Yu, C., Eds. Cham: Springer International Publishing, 2016, pp. 89–105.
P. Kankaanpää, Paavolainen, L., Tiitta, S., Karjalainen, M., Päivärinne, J., Nieminen, J., Marjomäki, V., Heino, J., and White, D. J., “BioImageXD: an open, general-purpose and high-throughput image-processing platform.”, Nat Methods, vol. 9, no. 7, pp. 683-9, 2012.
S. Rea, Pathak, J., Savova, G., Oniki, T. A., Westberg, L., Beebe, C. E., Tao, C., Parker, C. G., Haug, P. J., Huff, S. M., and Chute, C. G., “Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project.”, J Biomed Inform, 2012.
S. Rea, Pathak, J., Savova, G., Oniki, T. A., Westberg, L., Beebe, C. E., Tao, C., Parker, C. G., Haug, P. J., Huff, S. M., and Chute, C. G., “Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project.”, J Biomed Inform, 2012.
C
J. J. Cimino, Hayamizu, T. F., Bodenreider, O., Davis, B., Stafford, G. A., and Ringwald, M., “The caBIG terminology review process.”, J Biomed Inform, vol. 42, no. 3, pp. 571-80, 2009.
L. Becnel Boyd, Hunicke-Smith, S. P., Stafford, G. A., Freund, E. T., Ehlman, M., Chandran, U., Dennis, R., Fernandez, A. T., Goldstein, S., Steffen, D., Tycko, B., and Klemm, J. D., “The caBIG® Life Science Business Architecture Model.”, Bioinformatics, vol. 27, no. 10, pp. 1429-35, 2011.
S. Oster, Langella, S., Hastings, S., Ervin, D., Madduri, R., Phillips, J., Kurc, T., Siebenlist, F., Covitz, P., Shanbhag, K., Foster, I., and Saltz, J., “caGrid 1.0: an enterprise Grid infrastructure for biomedical research.”, Journal of the American Medical Informatics Association : JAMIA, vol. 15, no. 2, pp. 138-49, 2008.
B. Cakici, Hebing, K., Grünewald, M., Saretok, P., and Hulth, A., “CASE: a framework for computer supported outbreak detection.”, BMC medical informatics and decision making, vol. 10, p. 14, 2010.
B. Cakici, Hebing, K., Grünewald, M., Saretok, P., and Hulth, A., “CASE: a framework for computer supported outbreak detection.”, BMC medical informatics and decision making, vol. 10, p. 14, 2010.
J. Czwoydzinski, Girnus, R., Sommer, A., Heindel, W., and Lenzen, H., “[Central online quality assurance in radiology: an IT solution exemplified by the German Breast Cancer Screening Program].”, Rofo, vol. 183, no. 9, pp. 849-54, 2011.
R. Marée, Rollus, L., Stévens, B., Hoyoux, R., Louppe, G., Vandaele, R., Begon, J. - M., Kainz, P., Geurts, P., and Wehenkel, L., “Collaborative analysis of multi-gigapixel imaging data using Cytomine.”, Bioinformatics, vol. 32, no. 9, pp. 1395-401, 2016.
G. Stauch, Miringa, A., Raoufi, R., Vathana, C. Serey, Hetzmann, S., Hinsch, N., Dalquen, P., Voelker, U., and Kunze, D., “Computational Pathology and Telepathology: SY05-1 TELECYTOLOGY TC AND TELEPATHOLOGY TP IN UNDERSERVED COUNTRIES TOY OR TOOL?”, Pathology, vol. 46 Suppl 2, p. S7, 2014.
G. Stauch, Miringa, A., Raoufi, R., Vathana, C. Serey, Hetzmann, S., Hinsch, N., Dalquen, P., Voelker, U., and Kunze, D., “Computational Pathology and Telepathology: SY05-1 TELECYTOLOGY TC AND TELEPATHOLOGY TP IN UNDERSERVED COUNTRIES TOY OR TOOL?”, Pathology, vol. 46 Suppl 2, p. S7, 2014.
P. Scolozzi, Momjian, A., and Heuberger, J., “Computer-aided volumetric comparison of reconstructed orbits for blow-out fractures with nonpreformed versus 3-dimensionally preformed titanium mesh plates: a preliminary study.”, Journal of computer assisted tomography, vol. 34, no. 1, pp. 98-104, 2010.
U. Rubens, Hoyoux, R., Vanosmael, L., Ouras, M., Tasset, M., Hamilton, C., Longuespée, R., and Marée, R., “Cytomine: Toward an Open and Collaborative Software Platform for Digital Pathology Bridged to Molecular Investigations.”, Proteomics Clin Appl, vol. 13, no. 1, p. e1800057, 2019.
U. Rubens, Hoyoux, R., Vanosmael, L., Ouras, M., Tasset, M., Hamilton, C., Longuespée, R., and Marée, R., “Cytomine: Toward an Open and Collaborative Software Platform for Digital Pathology Bridged to Molecular Investigations.”, Proteomics Clin Appl, vol. 13, no. 1, p. e1800057, 2019.
D
W. Wang, Mahakala, K. Reddy, Gupta, A., Hussein, N., and Wang, Y., “Data on security requirements in open-source software projects.”, Data Brief, vol. 25, p. 103590, 2019.

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