Bibliography

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Author Title Type [ Year(Asc)]
2016
A. Rajagopal, Dembia, C., DeMers, M., Delp, D., Hicks, J., and Delp, S., Full body musculoskeletal model for muscle-driven simulation of human gait., IEEE Trans Biomed Eng, 2016.
A. Ledesma, Al-Musawi, M., and Nieminen, H., Health figures: an open source JavaScript library for health data visualization., BMC Med Inform Decis Mak, vol. 16, no. 1, p. 38, 2016.
E. C. McKiernan, Bourne, P. E., C Brown, T., Buck, S., Kenall, A., Lin, J., McDougall, D., Nosek, B. A., Ram, K., Soderberg, C. K., Spies, J. R., Thaney, K., Updegrove, A., Woo, K. H., and Yarkoni, T., How open science helps researchers succeed., Elife, vol. 5, 2016.
P. Garaizar, Cubillas, C. P., and Matute, H., A HTML5 open source tool to conduct studies based on Libet's clock paradigm., Sci Rep, vol. 6, p. 32689, 2016.
T. Tuti, Bitok, M., Malla, L., Paton, C., Muinga, N., Gathara, D., Gachau, S., Mbevi, G., Nyachiro, W., Ogero, M., Julius, T., Irimu, G., and English, M., Improving documentation of clinical care within a clinical information network: an essential initial step in efforts to understand and improve care in Kenyan hospitals., BMJ Glob Health, vol. 1, no. 1, p. e000028, 2016.
T. Kapur, Pieper, S., Fedorov, A., Fillion-Robin, J. - C., Halle, M., O'Donnell, L., Lasso, A., Ungi, T., Pinter, C., Finet, J., Pujol, S., Jagadeesan, J., Tokuda, J., Norton, I., Estepar, R. San Jose, Gering, D., Aerts, H. J. W. L., Jakab, M., Hata, N., Ibanez, L., Blezek, D., Miller, J., Aylward, S., W Grimson, E. L., Fichtinger, G., Wells, W. M., Lorensen, W. E., Schroeder, W., and Kikinis, R., Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience., Med Image Anal, 2016.
B. Rance, Canuel, V., Countouris, H., Laurent-Puig, P., and Burgun, A., Integrating Heterogeneous Biomedical Data for Cancer Research: the CARPEM infrastructure., Appl Clin Inform, vol. 7, no. 2, pp. 260-74, 2016.
I. K. Moutsatsos, Hossain, I., Agarinis, C., Harbinski, F., Abraham, Y., Dobler, L., Zhang, X., Wilson, C. J., Jenkins, J. L., Holway, N., Tallarico, J., and Parker, C. N., Jenkins-{CI}, an {Open}-{Source} {Continuous} {Integration} {System}, as a {Scientific} {Data} and {Image}-{Processing} {Platform}, Journal of Biomolecular Screening, 2016.
Y. Wu, Denny, J. C., S Rosenbloom, T., Miller, R. A., Giuse, D. A., Wang, L., Blanquicett, C., Soysal, E., Xu, J., and Xu, H., A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD)., J Am Med Inform Assoc, 2016.
K. Kim, Kim, H. Keun, Lim, H., and Myung, H., A Low Cost/Low Power Open Source Sensor System for Automated Tuberculosis Drug Susceptibility Testing., Sensors (Basel), vol. 16, no. 6, 2016.
O. Rübel, Dougherty, M., Prabhat, null, Denes, P., Conant, D., Chang, E. F., and Bouchard, K., Methods for {Specifying} {Scientific} {Data} {Standards} and {Modeling} {Relationships} with {Applications} to {Neuroscience}, Frontiers in Neuroinformatics, vol. 10, p. 48, 2016.
D. M. Rosenberg and Horn, C. C., Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks., J Neurophysiol, p. jn.00137.2016, 2016.
A. E. Williamson, Ylioja, P. M., Robertson, M. N., Antonova-Koch, Y., Avery, V., Baell, J. B., Batchu, H., Batra, S., Burrows, J. N., Bhattacharyya, S., Calderon, F., Charman, S. A., Clark, J., Crespo, B., Dean, M., Debbert, S. L., Delves, M., Dennis, A. S. M., Deroose, F., Duffy, S., Fletcher, S., Giaever, G., Hallyburton, I., Gamo, F. - J., Gebbia, M., R. Guy, K., Hungerford, Z., Kirk, K., Lafuente-Monasterio, M. J., Lee, A., Meister, S., Nislow, C., Overington, J. P., Papadatos, G., Patiny, L., Pham, J., Ralph, S. A., Ruecker, A., Ryan, E., Southan, C., Srivastava, K., Swain, C., Tarnowski, M. J., Thomson, P., Turner, P., Wallace, I. M., Wells, T. N. C., White, K., White, L., Willis, P., Winzeler, E. A., Wittlin, S., and Todd, M. H., Open {Source} {Drug} {Discovery}: {Highly} {Potent} {Antimalarial} {Compounds} {Derived} from the {Tres} {Cantos} {Arylpyrroles}, ACS central science, vol. 2, pp. 687–701, 2016.
W. C. Van Voorhis, Adams, J. H., Adelfio, R., Ahyong, V., Akabas, M. H., Alano, P., Alday, A., Resto, Y. Alemán, Alsibaee, A., Alzualde, A., Andrews, K. T., Avery, S. V., Avery, V. M., Ayong, L., Baker, M., Baker, S., Ben Mamoun, C., Bhatia, S., Bickle, Q., Bounaadja, L., Bowling, T., Bosch, J., Boucher, L. E., Boyom, F. F., Brea, J., Brennan, M., Burton, A., Caffrey, C. R., Camarda, G., Carrasquilla, M., Carter, D., Cassera, M. Belen, Cheng, K. Chih- Chien, Chindaudomsate, W., Chubb, A., Colon, B. L., Colón-López, D. D., Corbett, Y., Crowther, G. J., Cowan, N., D'Alessandro, S., Le Dang, N., Delves, M., DeRisi, J. L., Du, A. Y., Duffy, S., El-Sayed, S. Abd El- Sal, Ferdig, M. T., Robledo, J. A. Fernánd, Fidock, D. A., Florent, I., Fokou, P. V. T., Galstian, A., Gamo, F. Javier, Gokool, S., Gold, B., Golub, T., Goldgof, G. M., Guha, R., W Guiguemde, A., Gural, N., R Guy, K., Hansen, M. A. E., Hanson, K. K., Hemphill, A., van Huijsduijnen, R. Hooft, Horii, T., Horrocks, P., Hughes, T. B., Huston, C., Igarashi, I., Ingram-Sieber, K., Itoe, M. A., Jadhav, A., Jensen, A. Naranuntar, Jensen, L. T., H Y Jiang, R., Kaiser, A., Keiser, J., Ketas, T., Kicka, S., Kim, S., Kirk, K., Kumar, V. P., Kyle, D. E., Lafuente, M. Jose, Landfear, S., Lee, N., Lee, S., Lehane, A. M., Li, F., Little, D., Liu, L., Llinás, M., Loza, M. I., Lubar, A., Lucantoni, L., Lucet, I., Maes, L., Mancama, D., Mansour, N. R., March, S., McGowan, S., Vera, I. Medina, Meister, S., Mercer, L., Mestres, J., Mfopa, A. N., Misra, R. N., Moon, S., Moore, J. P., da Costa, F. Morais Rod, Müller, J., Muriana, A., Hewitt, S. Nakazawa, Nare, B., Nathan, C., Narraidoo, N., Nawaratna, S., Ojo, K. K., Ortiz, D., Panic, G., Papadatos, G., Parapini, S., Patra, K., Pham, N., Prats, S., Plouffe, D. M., Poulsen, S. - A., Pradhan, A., Quevedo, C., Quinn, R. J., Rice, C. A., Rizk, M. Abdo, Ruecker, A., St Onge, R., Ferreira, R. Salgado, Samra, J., Robinett, N. G., Schlecht, U., Schmitt, M., Villela, F. Silva, Silvestrini, F., Sinden, R., Smith, D. A., Soldati, T., Spitzmüller, A., Stamm, S. Maximilian, Sullivan, D. J., Sullivan, W., Suresh, S., Suzuki, B. M., Suzuki, Y., S Swamidass, J., Taramelli, D., R Y Tchokouaha, L., Theron, A., Thomas, D., Tonissen, K. F., Townson, S., Tripathi, A. K., Trofimov, V., Udenze, K. O., Ullah, I., Vallieres, C., Vigil, E., Vinetz, J. M., Vinh, P. Voong, Vu, H., Watanabe, N. - A., Weatherby, K., White, P. M., Wilks, A. F., Winzeler, E. A., Wojcik, E., Wree, M., Wu, W., Yokoyama, N., Zollo, P. H. A., Abla, N., Blasco, B., Burrows, J., Laleu, B., Leroy, D., Spangenberg, T., Wells, T., and Willis, P. A., Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond., PLoS Pathog, vol. 12, no. 7, p. e1005763, 2016.
T. Benson, Open {Source} {Paradigm}: {A} {Synopsis} of {The} {Cathedral} and the {Bazaar} for {Health} and {Social} {Care}, Journal of Innovation in Health Informatics, vol. 23, pp. 488–492, 2016.
C. Llamas, González, M. A., Hernández, C., and Vegas, J., Open Source Platform for Collaborative Construction of Wearable Sensor Datasets for Human Motion Analysis and an Application for Gait Analysis., J Biomed Inform, 2016.
J. Rey-Martinez and Pérez-Fernández, N., Open source posturography., Acta Otolaryngol, pp. 1-5, 2016.
L. Munoz, Ziebell, A., Morton, J., and Bhat, M., An open source solution for an in-house built dynamic platform for the validation of stereotactic ablative body radiotherapy for VMAT and IMRT., Australas Phys Eng Sci Med, 2016.
G. Niezen, Eslambolchilar, P., and Thimbleby, H., Open-source hardware for medical devices., BMJ Innov, vol. 2, no. 2, pp. 78-83, 2016.
K. M. Landgraf, Kakkar, R., Meigs, M., Jankauskas, P. T., Phan, T. Thu Huong, Nguyen, V. Nga, Nguyen, D. Thai, Duong, T. Tung, Nguyen, T. Hoa, and Bond, K. B., Open-source LIMS in Vietnam: The path toward sustainability and host country ownership., Int J Med Inform, vol. 93, pp. 92-102, 2016.
T. Ungi, Lasso, A., and Fichtinger, G., Open-source platforms for navigated image-guided interventions., Med Image Anal, 2016.
M. E. Poorman, Chaplin, V. L., Wilkens, K., Dockery, M. D., Giorgio, T. D., Grissom, W. A., and Caskey, C. F., Open-source, small-animal magnetic resonance-guided focused ultrasound system., J Ther Ultrasound, vol. 4, no. 1, p. 22, 2016.
E. McHenry, Open-sourced coding expands UMN's StudyFinder to additional CTSA institutions, EurekAlert!, 2016. [Online]. Available: http://www.eurekalert.org/pub_releases/2016-04/uoma-oce042616.php.
O. Ratib, Roduit, N., Nidup, D., De Geer, G., Rosset, A., and Geissbuhler, A., PACS for Bhutan: a cost effective open source architecture for emerging countries., Insights Imaging, 2016.
S. M. Shenoy, Performing Quantitative Imaging Acquisition, Analysis and Visualization Using the Best of Open Source and Commercial Software Solutions., Microsc Microanal, vol. 22, no. Suppl 3, pp. 2064-2065, 2016.

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