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The dinifti program converts MRI images stored in DICOM format to NIfTI format.
OpenHRE is the world's first open source toolkit that provides a standard and secure means to exchange data between existing health records systems. With OpenHRE, health professionals can locate, access, and review clinical data related to a specific health consumer, or acquire de-identified clinical data for population studies.
A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.
Grassroots DICOM (GDCM) is an implementation of the DICOM standard designed to be open source so that researchers may access clinical data directly. GDCM includes a file format definition and a network communications protocol, both of which should be extended to provide a full set of tools for a researcher or small medical imaging vendor to interface with an existing medical database.
Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes.
Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 data format. nifti-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images.
Niftilib currently has C, Java, MATLAB, and Python libraries; we plan to add some MATLAB/mex interfaces to the C library in the not too distant future.
MRmap is a flexible software tool that enables T1, T2, and T2* mapping from source images of multiple types of pulse sequences (IR-prepared multi-image T1 mapping, Look-Locker/ TOMROP T1 mapping, MOLLI T1 mapping; single- and multi-echo T2/ T2* mapping).
MRmap is a pure research tool and is not intended for any diagnostic or clinical use.
Brainstorm is a collaborative open-source Matlab application dedicated to magnetoencephalography (MEG) and electroencephalography(EEG) data visualization, processing and cortical source estimation.
The intention is to make a comprehensive set of tools available to the scientific community involved in MEG/EEG experimental research.
For physicians and researchers, the interest of this software package resides in its rich and intuitive graphic interface, which does not require any programming knowledge.
OpenEMed is a set of distributed healthcare information service components built around the OMG distributed object specifications and the HL7 (and other) data standards and is written in Java for platform portability. We emphasize the interoperable service functionality that this approach provides in reducing the time it takes to build a healthcare related system. It is not intended as a turnkey system but rather a set of components that can be assembled and configured to meet a variety of tasks.
"According to the homepage: "After nearly 10 years, the openCDMS system..."
posted by holger on openCDMS 6 years 8 months
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"Glucosio wins award from Black Duck for top new OSS projects in 2015!
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posted by demski on Glucosio 8 years 1 month
"Free D Path in 2014 won an award in the category of ‘best use of IT to..."
posted by demski on Free D Path 9 years 2 months
"AuShadha Open Source EMR has moved to Django 1.7.x
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posted by dreaswar on AuShadha 9 years 5 months